Pseudogenomes for 1135 Arabidopsis thaliana strains were generated by combining reference and variant calls including indels, with uncalled sites represented as Ns. With this tool, specific genome regions and accessions can be selected for FASTA download. Col0 annotated regions are interpolated for the applicable strain.
- Pseudogenomes (download FASTA files from the 1001 Genomes Data Center) were generated by Alexander Platzer.
Web app and database development was done by Joffrey Fitz.
- The 1001 Genomes Consortium (2015). 1135 sequenced natural inbred lines reveal the global pattern of polymorphism in Arabidopsis thaliana. Manuscript submitted for publication.
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