VCF Download
Download Subsets of 1001 VCF Files. More...
Please select a set of strains.
| Ecotype ID | Name | CS Number | Country | Group |
|---|
VCF Download
Download Subsets of 1001 VCF Files. More...
Select one or more loci. Specify gene identifiers (e.g. At1G01070) or regions (e.g. Chr1:9001000..10001000).
Pseudogenomes Download
Reference combined with variants including indels. More...
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About
VCFSubset for 1135 Arabidopsis thaliana strains is a tool that facilitates the extraction and download of slices of our fullgenome VCF and SnpEff annotated VCF.
Credits
- Fullgenome and SnpEff VCF were generated by Congmao Wang.
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Web app and architecture by Joffrey Fitz.
References
- The 1001 Genomes Consortium (2015). 1135 sequenced natural inbred lines reveal the global pattern of polymorphism in Arabidopsis thaliana. Manuscript submitted for publication.
Pseudogenomes Download
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