1001Genomes Tools

Overview

We maintain tools for data download, visualization, and analysis developed within the scope of the Arabidopsis thaliana 1001 Genomes sequencing project.

Ahead of publication we provide beta versions of our apps. More tools and features will be released with time.

Currently available tools:

Pseudogenomes

Download sequences for specific genome regions for selected accessions

Admixture Map

View ADMIXTURE group membership

Strain ID

Upload VCF variants and get closest accession included within the 1135 set

VCF Subset

Download Subsets of 1001 VCF Files

AraPheno

A public database collection of Arabidopsis thaliana phenotypes

AraGWAS

A public database catalog of Arabidopsis thaliana associations from published GWAS studies.

AraGeno

An easy way to identify your Arabidopsis thaliana plant

About

TBD

Pseudogenomes Download

Something went wrong ...

Error:

© 2015-2017 Max Planck Institute for Developmental Biology, Tübingen. http://www.weigelworld.org    Disclaimer / Impressum    Need Support?